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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015905371.1_cds_XP_016455588.1_49509
CDS Infomation

[gene=LOC107779645] [db_xref=GeneID:107779645] [protein=serine/threonine-protein kinase CDL1-like] [protein_id=XP_016455588.1] [location=complement(join(16886..17044,17135..17224,17355..17487,17799..18187,19187..19431,19840..20158))] [gbkey=CDS]
Sequence

ATGGAAAATAACAACACTGGAATTGCAACAAGCCCAGTTGGATGGAAAAGTAACCATAGC
CATAGCCATCATCATTTGGAATCACAAAGTCATAAAATCCACCGACATAATGACATGCTC
CCTTCTACATCTATTCTGTTGATAATAATTCCCATCATAATTATCATCTTGCTTATTGCA
ATATCTCTTCTCATTGTAATGCTTAAGCGCATACAGTCTGCCAAAGACAATGGGATTAGT
TCAAAAAGCAGAAGTGTCATCAACAATAGCAATTGTATGTTCATTGCTCATAGTACCATT
AACATCCATTCCAGCCCAGAAGTGAAGGGTGGATGTCTGCATGGAGGAAGTTCAGGGCGA
ATGCCACAACCTAAATTGAGAGGAGTTCAAGTATTCACTTACAAAGAGCTGGAGATGTCC
ACAGACAAATTTAGTGAGGCAAATGTCATCGGGAATGGAGGTTATGGGGTTGTCTACAAA
GGAGTCCTCACTGATGGGACTGTGGCTGCAATTAAAGTTTTGCAGAGGGAAGGCAAACAA
TGGGAGCGTTCATTTAGATTAGAGGTGGATTTACTAAGTCGCTTACACTCTCCTTACTTG
GTTGAACTTCTTGGATACTGCGCAGACCAACAACACAGGCTCCTAATTTTTGACTATATG
CCCAATGGTTCACTGCAACAACATCTCCACAGCCCACAAAAACAATCCAAGAATTCATTA
AACTGGGGAGTTAGATTGAGAATAGCTCTTGATTGTGCTAGAGCCTTGGAATACATGCAT
GAACACACAACCCCATCAGTCATCCACAGAGATTTCAAGTGCAGTAATGTTCTACTTGAT
CAAGATTTTAGAGCTAAGGTCTCTGATTTTGGGCTAGCAAAAATTGGCTCAGACAAAATC
AACGGTCTAATCTCAACGCGAGTATTAGGGACCACTGGATATTTGGCCCCAGAGTATGCT
TCAACAGGCAAACTTACAACAAAATCAGATGTATACAGCTACGGTGTGGTGCTTCTAGAG
CTATTGACAGGCCGTGTACCAATCGATACAAAGCGACCTCCTGGAGAACATGTGCTTGTC
TCATGGGCTCTTCCAAGATTGACAAACAGAGAAAAAGTAGTTGAAATGGTAGATCCAACA
TTAGAAGGCCAGTACACCAAGAAGGATCTAATACAGGTAGCAGCTATAGCAGCAATGTGT
GTGCAAACAGAAGCAGATTATCGCCCATTAATGACGGACGTTGTTCAATCCTTAATACCT
CTAGTCAAGACTTACTCTTCTTCATGTCCTTCCAATTCCTTCAGATGCAACCAAACAGTT
AGTCCGAGGTCTTAG

Peptide Sequence

PEP ID

XP_016455588.1
PEP Infomation

PREDICTED: serine/threonine-protein kinase CDL1-like [Nicotiana tabacum]
Sequence

MENNNTGIATSPVGWKSNHSHSHHHLESQSHKIHRHNDMLPSTSILLIIIPIIIIILLIA
ISLLIVMLKRIQSAKDNGISSKSRSVINNSNCMFIAHSTINIHSSPEVKGGCLHGGSSGR
MPQPKLRGVQVFTYKELEMSTDKFSEANVIGNGGYGVVYKGVLTDGTVAAIKVLQREGKQ
WERSFRLEVDLLSRLHSPYLVELLGYCADQQHRLLIFDYMPNGSLQQHLHSPQKQSKNSL
NWGVRLRIALDCARALEYMHEHTTPSVIHRDFKCSNVLLDQDFRAKVSDFGLAKIGSDKI
NGLISTRVLGTTGYLAPEYASTGKLTTKSDVYSYGVVLLELLTGRVPIDTKRPPGEHVLV
SWALPRLTNREKVVEMVDPTLEGQYTKKDLIQVAAIAAMCVQTEADYRPLMTDVVQSLIP
LVKTYSSSCPSNSFRCNQTVSPRS

Transcript Sequence

Gene sequence data has not been registered.